An Optimization Method for Performance Improvement of Set-based Similar Sequence Matching 


Vol. 45,  No. 4, pp. 403-407, Apr.  2018
10.5626/JOK.2018.45.4.403


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  Abstract

The set-based similar sequence matching method involves searching for data set sequences that are similar to a query set sequence. In the method, the similarity between two sets is represented as the size of intersection between them. However, there is a critical performances issue for calculating intersection size if the number of sets is large. In the past, authors of the present work proposed a method to improve the performance of set-based similar sequence matching using simple index structure. In this paper, we propose an optimization method for more efficient running of set-based similar sequence matching. Our method is based on pruning that excludes unnecessary calculation. Through experiments, we show that the proposed method reduces the execution time by about 20% compared to the existing methods.


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  Cite this article

[IEEE Style]

H. Lim and J. Lee, "An Optimization Method for Performance Improvement of Set-based Similar Sequence Matching," Journal of KIISE, JOK, vol. 45, no. 4, pp. 403-407, 2018. DOI: 10.5626/JOK.2018.45.4.403.


[ACM Style]

Hyo-Sang Lim and Juwon Lee. 2018. An Optimization Method for Performance Improvement of Set-based Similar Sequence Matching. Journal of KIISE, JOK, 45, 4, (2018), 403-407. DOI: 10.5626/JOK.2018.45.4.403.


[KCI Style]

임효상, 이주원, "집합 기반 유사 시퀀스 매칭의 성능 향상을 위한 최적화 방법," 한국정보과학회 논문지, 제45권, 제4호, 403~407쪽, 2018. DOI: 10.5626/JOK.2018.45.4.403.


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